Bibliography of publications that used Microscopy Laboratory
Proper Citation: New York University Grossman School of Medicine, Langone Health Microscopy Laboratory Core Facility (RRID:SCR_017934)
Grouped by year & alphabetical by first author, does not include bioRxiv or other "preprints"
Some of these publications do not properly acknowledge the core or have core staff as authors.
last updated 2024-03-19

2024

  1. Bekku Y, Zotter B, You C, Piehler J, Leonard WJ, Salzer JL. Glia trigger endocytic clearance of axonal proteins to promote rodent myelination. Dev Cell. 2024 Mar 11;59(5):627-644.e10. doi: 10.1016/j.devcel.2024.01.008. PMID: 38309265
  2. Britton D, Christians LF, Liu C, Legocki J, Xiao Y, Meleties M, Yang L, Cammer M, Jia S, Zhang Z, Mahmoudinobar F, Kowalski Z, Renfrew PD, Bonneau R, Pochan DJ, Pak AJ, Montclare JK. Computational Prediction of Coiled-Coil Protein Gelation Dynamics and Structure. Biomacromolecules. 2024 Jan 8;25(1):258-271. doi: 10.1021/acs.biomac.3c00968. PMID: 38110299 [Stellaris] [IJ]
  3. Qian W, Yamaguchi N, Lis P, Cammer M, Knaut H. Pulses of RhoA signaling stimulate actin polymerization and flow in protrusions to drive collective cell migration. Curr Biol. 2024 Jan 22;34(2):245-259.e8. doi: 10.1016/j.cub.2023.11.044. PMID: 38096821

2023

  1. Antao NV, Lam C, Davydov A, Riggi M, Sall J, Petzold C, Liang FX, Iwasa JH, Ekiert DC, Bhabha G. 3D reconstructions of parasite development and the intracellular niche of the microsporidian pathogen Encephalitozoon intestinalis. Nat Commun. 2023 Nov 23;14(1):7662. doi: 10.1038/s41467-023-43215-0. PMID: 37996434
  2. Benjamin Abrams, Thomas Pengo, Tse-Luen Wee, Rebecca C Deagle, Nelly Vuillemin, Linda M Callahan, Megan A Smith, Kristopher E Kubow, Anne-Marie Girard, Joshua Z Rappoport, Carol J Bayles, Lisa A Cameron, Richard Cole, Claire M Brown. Tissue-Like 3D Standard and Protocols for Microscope Quality Management. Microscopy and Microanalysis, Volume 29, Issue 2, April 2023, Pages 616–634. https://academic.oup.com/mam/advance-article/doi/10.1093/micmic/ozad014/7069290
  3. Akkapeddi P, Hattori T, Khan I, Glasser E, Koide A, Ketavarapu G, Whaby M, Zuberi M, Teng KW, Lefler J, Maso L, Bang I, Ostrowski MC, O'Bryan JP, Koide S. Exploring switch II pocket conformation of KRAS(G12D) with mutant-selective monobody inhibitors. Proc Natl Acad Sci USA. 2023 Jul 11;120(28):e2302485120. doi: 10.1073/pnas.2302485120. Epub 2023 Jul 3. PMID: 37399416
  4. Castillo RL, Sidhu I, Dolgalev I, Chu T, Prystupa A, Subudhi I, Yan D, Konieczny P, Hsieh B, Haberman RH, Selvaraj S, Shiomi T, Medina R, Girija PV, Heguy A, Loomis CA, Chiriboga L, Ritchlin C, Garcia-Hernandez ML, Carucci J, Meehan SA, Neimann AL, Gudjonsson JE, Scher JU, Naik S. Spatial transcriptomics stratifies psoriatic disease severity by emergent cellular ecosystems. Sci Immunol. 2023 Jun 8;8(84):eabq7991. doi: 10.1126/sciimmunol.abq7991. PMID: 37267384
  5. Chen J, Soni RK, Xu Y, Simoes S, Liang FX, DeFreitas L, Hwang R Jr, Montesinos J, Lee JH, Area-Gomez E, Nandakumar R, Vardarajan B, Marquer C. Juvenile CLN3 disease is a lysosomal cholesterol storage disorder: similarities with Niemann-Pick type C disease. EBioMedicine. 2023 Jun;92:104628. doi: 10.1016/j.ebiom.2023.104628. PMID: 37245481
  6. Chen YH, Yeung F, Lacey KA, Zaldana K, Lin JD, Bee GCW, McCauley C, Barre RS, Liang SH, Hansen CB, Downie AE, Tio K, Weiser JN, Torres VJ, Bennett RJ, Loke P, Graham AL, Cadwell K. Rewilding of laboratory mice enhances granulopoiesis and immunity through intestinal fungal colonization. Sci Immunol. 2023 Jun 23;8(84):eadd6910. doi: 10.1126/sciimmunol.add6910. Epub 2023 Jun 23. PMID: 37352372 [confocal]
  7. Chen X, Lu Q, Zhou H, Liu J, Nadorp B, Lasry A, Sun Z, Lai B, Rona G, Zhang J, Cammer M, Wang K, Al-Santli W, Ciantra Z, Guo Q, You J, Sengupta D, Boukhris A, Zhang H, Liu C, Cresswell P, Dahia PLM, Pagano M, Aifantis I, Wang J. A membrane-associated MHC-I inhibitory axis for cancer immune evasion. Cell. 2023 Aug 8:S0092-8674(23)00783-3. doi: 10.1016/j.cell.2023.07.016. PMID: 37557169 [Stellaris, 880]
  8. Glytsou C, Chen X, Zacharioudakis E, Al-Santli W, Zhou H, Nadorp B, Lee S, Lasry A, Sun Z, Papaioannou D, Cammer M, Wang K, Zal T, Zal MA, Carter BZ, Ishizawa J, Tibes R, Tsirigos A, Andreeff M, Gavathiotis E, Aifantis I. Mitophagy promotes resistance to BH3 mimetics in acute myeloid leukemia. Cancer Discov. 2023 Apr 24:CD-22-0601. doi: 10.1158/2159-8290.CD-22-0601. PMID: 37088914
  9. Feng-Xia Liang, Joseph Sall, Chris Petzold, Chantal J.M. van Opbergen, Xiangxi Liang, Mario Delmar. Nanogold based protein localization enables subcellular visualization of cell junction protein by SBF-SEM. Methods in Cell Biology. 17 April 2023. https://doi.org/10.1016/bs.mcb.2022.12.020
  10. Frenster JD, Erdjument-Bromage H, Stephan G, Ravn-Boess N, Wang S, Liu W, Bready D, Wilcox J, Kieslich B, Jankovic M, Wilde C, Horn S, Sträter N, Liebscher I, Schöneberg T, Fenyo D, Neubert TA, Placantonakis DG. PTK7 is a positive allosteric modulator of GPR133 signaling in glioblastoma. Cell Rep. 2023 Jun 23;42(7):112679. doi: 10.1016/j.celrep.2023.112679. PMID: 37354459 [confocal]
  11. Fu Y, Sacco O, DeBitetto E, Kanshin E, Ueberheide B, Sfeir A. Mitochondrial DNA breaks activate an integrated stress response to reestablish homeostasis. Mol Cell. 2023 Oct 8:S1097-2765(23)00753-0. doi: 10.1016/j.molcel.2023.09.026. PMID: 37832546
  12. Ilmain JK, Perelman SS, Panepinto MC, Irnov I, Coudray N, Samhadaneh N, Pironti A, Ueberheide B, Ekiert DC, Bhabha G, Torres VJ. Unlatching of the stem domains in the Staphylococcus aureus pore-forming leukocidin LukAB influences toxin oligomerization. J Biol Chem. 2023 Oct 4:105321. doi: 10.1016/j.jbc.2023.105321. PMID: 37802313
  13. Jang KK, Heaney T, London M, Ding Y, Putzel G, Yeung F, Ercelen D, Chen YH, Axelrad J, Gurunathan S, Zhou C, Podkowik M, Arguelles N, Srivastava A, Shopsin B, Torres VJ, Keestra-Gounder AM, Pironti A, Griffin ME, Hang HC, Cadwell K. Antimicrobial overproduction sustains intestinal inflammation by inhibiting Enterococcus colonization. Cell Host Microbe. 2023 Aug 25:S1931-3128(23)00327-X. doi: 10.1016/j.chom.2023.08.002. PMID: 37652008
  14. Lacey KA, Serpas L, Makita S, Wang Y, Rashidfarrokhi A, Soni C, Gonzalez S, Moreira A, Torres VJ, Reizis B. Secreted mammalian DNases protect against systemic bacterial infection by digesting biofilms. J Exp Med. 2023 Jun 5;220(6):e20221086. doi: 10.1084/jem.20221086. PMID: 36928522 [EM]
  15. Li J, Gui Q, Liang FX, Sall J, Zhang Q, Duan Y, Dhabaria A, Askenazi M, Ueberheide B, Stapleford KA, Pagano M. The REEP5/TRAM1 complex binds SARS-CoV-2 NSP3 and promotes virus replication. J Virol. 2023 Sep 28:e0050723. doi: 10.1128/jvi.00507-23. PMID: 37768083
  16. Li J, Krause GJ, Gui Q, Kaushik S, Rona G, Zhang Q, Liang FX, Dhabaria A, Anerillas C, Martindale JL, Vasilyev N, Askenazi M, Ueberheide B, Nudler E, Gorospe M, Cuervo AM, Pagano M. A noncanonical function of SKP1 regulates the switch between autophagy and unconventional secretion. Sci Adv. 2023 Oct 13;9(41):eadh1134. doi: 10.1126/sciadv.adh1134. PMID: 37831778
  17. Liang FX, Sall J, Petzold C, van Opbergen CJM, Liang X, Delmar M. Nanogold based protein localization enables subcellular visualization of cell junction protein by SBF-SEM. Methods Cell Biol. 2023;177:55-81. doi: 10.1016/bs.mcb.2022.12.020. PMID: 37451776
  18. McIntyre DC, Nance J. Niche cells regulate primordial germ cell quiescence in response to basement membrane signaling. Development. 2023 Jul 27:dev.201640. doi: 10.1242/dev.201640. PMID: 37497562
  19. Mukhopadhyay S, Encarnación-Rosado J, Lin EY, Sohn ASW, Zhang H, Mancias JD, Kimmelman AC. Autophagy supports mitochondrial metabolism through the regulation of iron homeostasis in pancreatic cancer. Sci Adv. 2023 Apr 21;9(16):eadf9284. doi: 10.1126/sciadv.adf9284. PMID: 37075122 [TEM]
  20. Ravn-Boess N, Roy N, Hattori T, Bready D, Donaldson H, Lawson C, Lapierre C, Korman A, Rodrick T, Liu E, Frenster JD, Stephan G, Wilcox J, Corrado AD, Cai J, Ronnen R, Wang S, Haddock S, Sabio Ortiz J, Mishkit O, Khodadadi-Jamayran A, Tsirigos A, Fenyö D, Zagzag D, Drube J, Hoffmann C, Perna F, Jones DR, Possemato R, Koide A, Koide S, Park CY, Placantonakis DG. The expression profile and tumorigenic mechanisms of CD97 (ADGRE5) in glioblastoma render it a targetable vulnerability. Cell Rep. 2023 Nov 7;42(11):113374. doi: 10.1016/j.celrep.2023.113374. PMID: 37938973 [confocal]
  21. Remark LH, Leclerc K, Ramsukh M, Lin Z, Lee S, Dharmalingam B, Gillinov L, Nayak VV, El Parente P, Sambon M, Atria PJ, Ali MAE, Witek L, Castillo AB, Park CY, Adams RH, Tsirigos A, Morgani SM, Leucht P. Loss of Notch signaling in skeletal stem cells enhances bone formation with aging. Bone Res. 2023 Sep 27;11(1):50. doi: 10.1038/s41413-023-00283-8. PMID: 37752132 [AxioObserver &/or 880]
  22. Robertson A, Sall J, Venzon M, Olivas JJ, Zheng X, Cammer M, Antao N, Zhou C, Devlin JC, Saes Thur R, Bethony J, Nejsum P, Shopsin B, Torres VJ, Liang FX, Cadwell K. Bacterial contact induces polar plug disintegration to mediate whipworm egg hatching. PLoS Pathog. 2023 Sep 22;19(9):e1011647. doi: 10.1371/journal.ppat.1011647. PMID: 37738244 [SEM, LM]
  23. St John, Amelia; Perault, Andrew I; Giacometti, Sabrina I; Sommerfield, Alexis G; DuMont, Ashley L; Lacey, Keenan A; Zheng, Xuhui; Sproch, Julia; Petzold, Chris; Dancel-Manning, Kristen; Gonzalez, Sandra; Annavajhala, Medini; Beckford, Colleen; Zeitouni, Nathalie; Liang, Feng-Xia; van Bakel, Harm; Shopsin, Bo; Uhlemann, Anne-Catrin; Pironti, Alejandro; Torres, Victor J. Capsular Polysaccharide Is Essential for the Virulence of the Antimicrobial-Resistant Pathogen Enterobacter hormaechei. mBio. 2023 Feb 13;e0259022. doi: 10.1128/mbio.02590-22.
  24. Sun Q, Lee W, Hu H, Ogawa T, De Leon S, Katehis I, Lim CH, Takeo M, Cammer M, Taketo MM, Gay DL, Millar SE, Ito M. Dedifferentiation maintains melanocyte stem cells in a dynamic niche. Nature. 2023 Apr 19. doi: 10.1038/s41586-023-05960-6. PMID: 37076619
  25. Sze S, Bhardwaj A, Fnu P, Azarm K, Mund R, Ring K, Smith S. TERRA R-loops connect and protect sister telomeres in mitosis. Cell Rep. 2023 Oct 31;42(10):113235. doi: 10.1016/j.celrep.2023.113235. PMID: 37843976 [AxioObserver no ack]
  26. Yeung ST, Ovando LJ, Russo AJ, Rathinam VA, Khanna KM. CD169+ macrophage intrinsic IL-10 production regulates immune homeostasis during sepsis. Cell Rep. 2023 Mar 28;42(3):112171. doi: 10.1016/j.celrep.2023.112171.PMID: 36867536
  27. Yie TA, Loomis CA, Nowatzky J, Khodadadi-Jamayran A, Lin Z, Cammer M, Barnett C, Mezzano V, Alu M, Novick JA, Munger JS, Kugler MC. Hedgehog and PDGF Signaling Intersect During Postnatal Lung Development. Am J Respir Cell Mol Biol. 2023 Jan 24. doi: 10.1165/rcmb.2022-0269OC. PMID: 36693140
  28. Zhao Y, Coelho C, Hughes AL, Lazar-Stefanita L, Yang S, Brooks AN, Walker RSK, Zhang W, Lauer S, Hernandez C, Cai J, Mitchell LA, Agmon N, Shen Y, Sall J, Fanfani V, Jalan A, Rivera J, Liang FX, Bader JS, Stracquadanio G, Steinmetz LM, Cai Y, Boeke JD. Debugging and consolidating multiple synthetic chromosomes reveals combinatorial genetic interactions. Cell. 2023 Oct 20:S0092-8674(23)01079-6. doi: 10.1016/j.cell.2023.09.025. PMID: 37944511 [SEM]

2022

  1. Blazer A, Qian Y, Schlegel MP, Algasas H, Buyon JP, Cadwell K, Cammer M, Heffron SP, Liang FX, Mehta-Lee S, Niewold T, Rasmussen SE, Clancy RM. APOL1 variant-expressing endothelial cells exhibit autophagic dysfunction and mitochondrial stress. Front Genet. 2022 Sep 27;13:769936. doi: 10.3389/fgene.2022.769936. eCollection 2022. PMID: 36238153 [NikonTi, Talos]
  2. Brawley DN, Sauer DB, Li J, Zheng X, Koide A, Jedhe GS, Suwatthee T, Song J, Liu Z, Arora PS, Koide S, Torres VJ, Wang DN, Traaseth NJ. Structural basis for inhibition of the drug efflux pump NorA from Staphylococcus aureus. Nat Chem Biol. 2022 Jul;18(7):706-712. doi: 10.1038/s41589-022-00994-9. Epub 2022 Mar 31. PMID: 35361990
  3. Ching KL, de Vries M, Gago J, Dancel-Manning K, Sall J, Rice WJ, Barnett C, Khodadadi-Jamayran A, Tsirigos A, Liang FX, Thorpe LE, Shopsin B, Segal LN, Dittmann M, Torres VJ, Cadwell K. ACE2-containing defensosomes serve as decoys to inhibit SARS-CoV-2 infection. PLoS Biol. 2022 Sep 13;20(9):e3001754. doi: 10.1371/journal.pbio.3001754. eCollection 2022 Sep. PMID: 36099266 (# 5335192)
  4. Churchill MJ, du Bois H, Heim TA, Mudianto T, Steele MM, Nolz JC, Lund AW. Infection-induced lymphatic zippering restricts fluid transport and viral dissemination from skin. J Exp Med. 2022 May 2;219(5):e20211830. doi: 10.1084/jem.20211830. Epub 2022 Mar 30. PMID: 35353138
  5. Huszár R, Zhang Y, Blockus H, Buzsáki G. Preconfigured dynamics in the hippocampus are guided by embryonic birthdate and rate of neurogenesis. Nat Neurosci. 2022 Sep;25(9):1201-1212. doi: 10.1038/s41593-022-01138-x. Epub 2022 Aug 22. PMID: 35995878
  6. Jaroenlak P, Usmani M, Ekiert DC, Bhabha G. Mechanics of Microsporidian Polar Tube Firing. Exp Suppl. 2022;114:215-245. doi: 10.1007/978-3-030-93306-7_9. PMID: 35544005
  7. Katyal P, Hettinghouse A, Meleties M, Hasan S, Chen C, Cui M, Sun G, Menon R, Lin B, Regatte R, Montclare JK, Liu CJ. Injectable recombinant block polymer gel for sustained delivery of therapeutic protein in post traumatic osteoarthritis. Biomaterials. 2022 Feb;281:121370. doi: 10.1016/j.biomaterials.2022.121370. Epub 2022 Jan 10. PMID: 35032910 [TEM]
  8. Kedmi R, Najar TA, Mesa KR, Grayson A, Kroehling L, Hao Y, Hao S, Pokrovskii M, Xu M, Talbot J, Wang J, Germino J, Lareau CA, Satpathy AT, Anderson MS, Laufer TM, Aifantis I, Bartleson JM, Allen PM, Paidassi H, Gardner JM, Stoeckius M, Littman DR. A RORγt+ cell instructs gut microbiota-specific Treg cell differentiation. Nature. 2022 Sep 7. doi: 10.1038/s41586-022-05089-y. PMID: 36071167 [Olympus 2P]
  9. Kleffman K, Levinson G, Rose IVL, Blumenberg LM, Shadaloey SAA, Dhabaria A, Wong E, Galan-Echevarria F, Karz A, Argibay D, Von Itter R, Floristan A, Baptiste G, Eskow NM, Tranos JA, Chen J, Vega Y Saenz de Miera EC, Call M, Rogers R, Jour G, Wadghiri YZ, Osman I, Li YM, Mathews P, DeMattos R, Ueberheide B, Ruggles KV, Liddelow SA, Schneider RJ, Hernando E. Melanoma-secreted Amyloid Beta Suppresses Neuroinflammation and Promotes Brain Metastasis. Cancer Discov. 2022 Feb 24:candisc.1006.2021. doi: 10.1158/2159-8290.CD-21-1006. PMID: 35262173 [880, TEM]
  10. Konieczny P, Xing Y, Sidhu I, Subudhi I, Mansfield KP, Hsieh B, Biancur DE, Larsen SB, Cammer M, Li D, Landén NX, Loomis C, Heguy A, Tikhonova AN, Tsirigos A, Naik S. Interleukin-17 governs hypoxic adaptation of injured epithelium. Science. 2022 Jun 16:eabg9302. doi: 10.1126/science.abg9302. PMID: 35709248
  11. Dr. Florian Küllmer, Dr. Nynke A. Vepřek, Dr. Malgorzata Borowiak, Dr. Veselin Nasufović, Sebastian Barutzki, Dr. Oliver Thorn-Seshold, Prof. Dr. Hans-Dieter Arndt, Prof. Dr. Dirk Trauner. Next Generation Opto-Jasplakinolides Enable Local Remodeling of Actin Networks. Angewandte Chemie International 01 September 2022 EditionVolume 61, Issue 48 e202210220 [880 no acknowledgement]
  12. Kurz E, Hirsch CA, Dalton T, Shadaloey SA, Khodadadi-Jamayran A, Miller G, Pareek S, Rajaei H, Mohindroo C, Baydogan S, Ngo-Huang A, Parker N, Katz MHG, Petzel M, Vucic E, McAllister F, Schadler K, Winograd R, Bar-Sagi D. Exercise-induced engagement of the IL-15/IL-15Rα axis promotes anti-tumor immunity in pancreatic cancer. Cancer Cell. 2022 May 31:S1535-6108(22)00217-3. doi: 10.1016/j.ccell.2022.05.006. PMID: 35660135 [700, no acknowledgement]
  13. LaRue MM, Parker S, Puccini J, Cammer M, Kimmelman AC, Bar-Sagi D. Metabolic reprogramming of tumor-associated macrophages by collagen turnover promotes fibrosis in pancreatic cancer. Proc Natl Acad Sci U S A. 2022 Apr 19;119(16):e2119168119. doi: 10.1073/pnas.2119168119. PMID: 35412885
  14. Leinwand JC, Paul B, Chen R, Xu F, Sierra MA, Paluru MM, Nanduri S, Alcantara Hirsch CG, Shadaloey SA, Yang F, Adam SA, Li Q, Bandel M, Gakhal I, Appiah L, Guo Y, Vardhan M, Flaminio ZJ, Grodman ER, Mermelstein A, Wang W, Diskin B, Aykut B, Khan M, Werba G, Pushalkar S, McKinstry M, Kluger Z, Park JJ, Hsieh B, Dancel-Manning K, Liang FX, Park JS, Saxena A, Li X, Theise ND, Saxena D, Miller G. Intrahepatic microbes govern liver immunity by programming NKT cells. J Clin Invest. 2022 Feb 17:e151725. doi: 10.1172/JCI151725. PMID: 35175938
  15. Lopez EM, Leclerc K, Ramsukh M, Parente PE, Patel K, Aranda CJ, Josephson AM, Remark LH, Kirby DJ, Buchalter DB, Hadi T, Morgani SM, Ramkhelawon B, Leucht P. Modulating the systemic and local adaptive immune response after fracture improves bone regeneration during aging. Bone. 2022 Apr;157:116324. doi: 10.1016/j.bone.2021.116324. Epub 2022 Jan 6. PMID: 34998981
  16. Maiti G, Monteiro de Barros MR, Hu N, Dolgalev I, Roshan M, Foster JW, Tsirigos A, Wahlin KJ, Chakravarti S. Single cell RNA-seq of human cornea organoids identifies cell fates of a developing immature cornea. PNAS Nexus. 2022 Oct 28;1(5):pgac246. doi: 10.1093/pnasnexus/pgac246. eCollection 2022 Nov. PMID: 36712326
  17. Matsuzawa-Ishimoto Y, Yao X, Koide A, Ueberheide BM, Axelrad JE, Reis BS, Parsa R, Neil JA, Devlin JC, Rudensky E, Dewan MZ, Cammer M, Blumberg RS, Ding Y, Ruggles KV, Mucida D, Koide S, Cadwell K. The γδ IEL effector API5 masks genetic susceptibility to Paneth cell death. Nature. 2022 Oct 5. doi: 10.1038/s41586-022-05259-y. PMID: 36198790
  18. Murareanu BM, Antao NV, Zhao W, Dubuffet A, El Alaoui H, Knox J, Ekiert DC, Bhabha G, Roy PJ, Reinke AW. High-throughput small molecule screen identifies inhibitors of microsporidia invasion and proliferation in C. elegans. Nat Commun. 2022 Sep 26;13(1):5653. doi: 10.1038/s41467-022-33400-y. PMID: 36163337
  19. Patel PS, Pérez-Baos S, Walters B, Orlen M, Volkova A, Ruggles K, Park CY, Schneider RJ. Translational regulation of TFH cell differentiation and autoimmune pathogenesis. Sci Adv. 2022 Jun 24;8(25):eabo1782. doi: 10.1126/sciadv.abo1782. Epub 2022 Jun 24. PMID: 35749506 [700 no acknowledgement]
  20. Pérez-Hernández M, van Opbergen CJM, Bagwan N, Vissing CR, Marrón-Liñares GM, Zhang M, Torres Vega E, Sorrentino A, Drici L, Sulek K, Zhai R, Hansen FB, Christensen AH, Boesgaard S, Gustafsson F, Rossing K, Small EM, Davies MJ, Rothenberg E, Sato PY, Cerrone M, Jensen THL, Qvortrup K, Bundgaard H, Delmar M, Lundby A. Loss of Nuclear Envelope Integrity and Increased Oxidant Production Cause DNA Damage in Adult Hearts Deficient in PKP2: A Molecular Substrate of ARVC. Circulation. 2022 Sep 13;146(11):851-867. doi: 10.1161/CIRCULATIONAHA.122.060454. Epub 2022 Aug 12. PMID: 35959657 [TEM no acknowledgement]
  21. Ren M, Xu Y, Phoon CKL, Erdjument-Bromage H, Neubert TA, Rajan S, Hussain MM, Schlame M. Condensed Mitochondria Assemble Into the Acrosomal Matrix During Spermiogenesis.
    Front Cell Dev Biol. 2022 Apr 21;10:867175. doi: 10.3389/fcell.2022.867175. eCollection 2022. PMID: 35531097
  22. Rostagno A, Cabrera E, Lashley T, Ghiso J. N-terminally truncated Aβ4-x proteoforms and their relevance for Alzheimer's pathophysiology. Transl Neurodegener. 2022 Jun 1;11(1):30. doi: 10.1186/s40035-022-00303-3. PMID: 35641972 [TEM]
  23. Sargsian S, Chen Z, Lee SC, Robertson A, Thur RS, Sproch J, Devlin JC, Tee MZ, Er YX, Copin R, Heguy A, Pironti A, Torres VJ, Ruggles KV, Lim YAL, Bethony J, Loke P, Cadwell K. Clostridia isolated from helminth-colonized humans promote the life cycle of Trichuris species. Cell Rep. 2022 Nov 29;41(9):111725. doi: 10.1016/j.celrep.2022.111725. PMID: 36450245
  24. Spina E, Simundza J, Incassati A, Chandramouli A, Kugler MC, Lin Z, Khodadadi-Jamayran A, Watson CJ, Cowin P. Gpr125 is a unifying hallmark of multiple mammary progenitors coupled to tumor latency. Nat Commun. 2022 Mar 17;13(1):1421. doi: 10.1038/s41467-022-28937-x. PMID: 35302059 [880]
  25. Tolkin T, Mohammad A, Starich TA, Nguyen KCQ, Hall DH, Schedl T, Hubbard EJA, Greenstein D. Innexin function dictates the spatial relationship between distal somatic cells in the Caenorhabditis elegans gonad without impacting the germline stem cell pool. Elife. 2022 Sep 13;11:e74955. doi: 10.7554/eLife.74955. PMID: 36098634 [Imaris]
  26. Tseng CY, Burel M, Cammer M, Harsh S, Flaherty MS, Baumgartner S, Bach EA. chinmo-mutant spermatogonial stem cells cause mitotic drive by evicting non-mutant neighbors from the niche. Dev Cell. 2022 Jan 10;57(1):80-94.e7. doi: 10.1016/j.devcel.2021.12.004. PMID: 34942115 [700 Imaris TEM]
  27. van Opbergen CJM, Sall J, Petzold C, Dancel-Manning K, Delmar M, Liang F-X. "Orphan" Connexin43 in Plakophilin-2 Deficient Hearts Revealed by Volume Electron Microscopy. Frontiers in Cell and Developmental Biology. 2022 https://www.frontiersin.org/article/10.3389/fcell.2022.843687 DOI=10.3389/fcell.2022.843687 ISSN=2296-634X eCollection 2022. PMID: 35663385 [SBFSEM]
  28. Venzon M, Bernard-Raichon L, Klein J, Axelrad JE, Zhang C, Hussey GA, Sullivan AP, Casanovas-Massana A, Noval MG, Valero-Jimenez AM, Gago J, Putzel G, Pironti A, Wilder E; Yale IMPACT Research Team, Thorpe LE, Littman DR, Dittmann M, Stapleford KA, Shopsin B, Torres VJ, Ko AI, Iwasaki A, Cadwell K, Schluter J. Gut microbiome dysbiosis during COVID-19 is associated with increased risk for bacteremia and microbial translocation. bioRxiv. 2022 Mar 2:2021.07.15.452246. doi: 10.1101/2021.07.15.452246. Preprint. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8902880/ PMID: 35262080
  29. Venzon M, Das R, Luciano DJ, Burnett J, Park HS, Devlin JC, Kool ET, Belasco JG, Hubbard EJA, Cadwell K. Microbial byproducts determine reproductive fitness of free-living and parasitic nematodes. Cell Host Microbe. 2022 Apr 5:S1931-3128(22)00145-7. doi: 10.1016/j.chom.2022.03.015. https://www.sciencedirect.com/science/article/pii/S1931312822001457 PMID: 35413267
  30. Vieni C, Coudray N, Isom GL, Bhabha G, Ekiert DC. Role of Ring6 in the Function of the E. coli MCE Protein LetB. J Mol Biol. 2022 Apr 15;434(7):167463. doi: 10.1016/j.jmb.2022.167463. Epub 2022 Jan 22. PMID: 35077766
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2021

  1. Abbadi D, Andrews JJ, Katsara O, Schneider RJ. AUF1 gene transfer increases exercise performance and improves skeletal muscle deficit in adult mice. Mol Ther Methods Clin Dev. 2021 Jul 29;22:222-236. doi: 10.1016/j.omtm.2021.07.005. eCollection 2021 Sep 10. PMID: 34485607 [no acknowledgement]
  2. Ahmed, Eman; Womble, C. Tyler; Cho, Jinwon; Dancel-Manning, Kristen; Rice, William J.; Jang, Seung Soon; Weck, Marcus. One-pot synthesis of linear triblock terpolymers and their aqueous self-Assembly. Polymer chemistry. 2021:12(13):1967-1974.DOI: 10.1039/d1py00054c
  3. Amengual J, Ogando Y, Nikain C, Quezada A, Qian K, Vaisar T, Fisher EA. Short-Term Acyl-CoA:Cholesterol Acyltransferase Inhibition, Combined with Apoprotein A1 Overexpression, Promotes Atherosclerosis Inflammation Resolution in Mice. Mol Pharmacol. 2021 Mar;99(3):175-183. doi: 10.1124/molpharm.120.000108. Epub 2020 Dec 31. PMID: 33384285 [IRM & IJ]
  4. Avila YI, Chandler M, Cedrone E, Newton HS, Richardson M, Xu J, Clogston JD, Liptrott NJ, Afonin KA, Dobrovolskaia MA. Induction of Cytokines by Nucleic Acid Nanoparticles (NANPs) Depends on the Type of Delivery Carrier. Molecules. 2021 Jan 27;26(3):652. doi: 10.3390/molecules26030652. PMID: 33513786 [Talos]
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  11. Chen S, Vurusaner B, Pena S, Thu CT, Mahal LK, Fisher EA, Canary JW. Two-Photon, Ratiometric, Quantitative Fluorescent Probe Reveals Fluctuation of Peroxynitrite Regulated by Arginase 1. Anal Chem. 2021 Jul 27;93(29):10090-10098. doi: 10.1021/acs.analchem.1c00911. Epub 2021 Jul 16. PMID: 34269045
  12. Choi JH, Horowitz LB, Ringstad N. Opponent vesicular transporters regulate the strength of glutamatergic neurotransmission in a C. elegans sensory circuit. Nat Commun. 2021 Nov 3;12(1):6334. doi: 10.1038/s41467-021-26575-3. PMID: 34732711 [TEM]
  13. Crowley L, Cambuli F, Aparicio L, Shibata M, Robinson BD, Xuan S, Li W, Hibshoosh H, Loda M, Rabadan R, Shen MM. A single-cell atlas of the mouse and human prostate reveals heterogeneity and conservation of epithelial progenitors. eLife. 2020; 9: e59465. Published online 2020 Sep 11. doi: 10.7554/eLife.59465 PMCID: PMC7529463
  14. Dallari S, Heaney T, Rosas-Villegas A, Neil JA, Wong SY, Brown JJ, Urbanek K, Herrmann C, Depledge DP, Dermody TS, Cadwell K. Enteric viruses evoke broad host immune responses resembling those elicited by the bacterial microbiome. Cell Host Microbe. 2021 Jun 9;29(6):1014-1029.e8. doi: 10.1016/j.chom.2021.03.015. Epub 2021 Apr 23. PMID: 33894129
  15. Dhasmana N, Ram G, McAllister KN, Chupalova Y, Lopez P, Ross HF, Novick RP. Dynamics of Antibacterial Drone Establishment in Staphylococcus aureus: Unexpected Effects of Antibiotic Resistance Genes. mBio. 2021 Dec 21;12(6):e0208321. doi: 10.1128/mBio.02083-21. Epub 2021 Nov 16. PMID: 34781740 [IJ LM]
  16. de Jong JO, Llapashtica C, Genestine M, Strauss K, Provenzano F, Sun Y, Zhu H, Cortese GP, Brundu F, Brigatti KW, Corneo B, Migliori B, Tomer R, Kushner SA, Kellendonk C, Javitch JA, Xu B, Markx S. Cortical overgrowth in a preclinical forebrain organoid model of CNTNAP2-associated autism spectrum disorder. Nat Commun. 2021 Sep 1;12(1):4087. doi: 10.1038/s41467-021-24358-4. PMID: 34471112 [Z1 lightsheet]
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  21. Fry AL, Webster AK, Burnett J, Chitrakar R, Baugh LR, Hubbard EJA. DAF-18/PTEN inhibits germline zygotic gene activation during primordial germ cell quiescence. PLoS Genet. 2021 Jul 21;17(7):e1009650. doi: 10.1371/journal.pgen.1009650. eCollection 2021 Jul. PMID: 34288923
  22. Garshick MS, Nikain C, Tawil M, Pena S, Barrett TJ, Wu BG, Gao Z, Blaser MJ, Fisher EA. Reshaping of the gastrointestinal microbiome alters atherosclerotic plaque inflammation resolution in mice. Sci Rep. 2021 Apr 26;11(1):8966. doi: 10.1038/s41598-021-88479-y. PMID: 33903700 [IJ no acknowledgement]
  23. Garshick MS, Tawil M, Barrett TJ, Salud-Gnilo CM, Eppler M, Lee A, Scher JU, Neimann AL, Jelic S, Mehta NN, Fisher EA, Krueger JG, Berger JS. Activated Platelets Induce Endothelial Cell Inflammatory Response in Psoriasis via COX-1. Arterioscler Thromb Vasc Biol. 2020 May;40(5):1340-1351. doi: 10.1161/ATVBAHA.119.314008. Epub 2020 Mar 5. PMID: 32131611
  24. Grau D, Zhang Y, Lee CH, Valencia-Sánchez M, Zhang J, Wang M, Holder M, Svetlov V, Tan D, Nudler E, Reinberg D, Walz T, Armache KJ. Structures of monomeric and dimeric PRC2:EZH1 reveal flexible modules involved in chromatin compaction. Nat Commun. 2021 Jan 29;12(1):714. doi: 10.1038/s41467-020-20775-z. PMID: 33514705 [880]
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  26. Hammond AJ, Binsker U, Aggarwal SD, Ortigoza MB, Loomis C, Weiser JN. Neuraminidase B controls neuraminidase A-dependent mucus production and evasion. PLoS Pathog. 2021 Apr 5;17(4):e1009158. doi: 10.1371/journal.ppat.1009158. eCollection 2021 Apr. PMID: 33819312
  27. Hartl J, Serpas L, Wang Y, Rashidfarrokhi A, Perez OA, Sally B, Sisirak V, Soni C, Khodadadi-Jamayran A, Tsirigos A, Caiello I, Bracaglia C, Volpi S, Ghiggeri GM, Chida AS, Sanz I, Kim MY, Belmont HM, Silverman GJ, Clancy RM, Izmirly PM, Buyon JP, Reizis B. Autoantibody-mediated impairment of DNASE1L3 activity in sporadic systemic lupus erythematosus. J Exp Med. 2021 May 3;218(5):e20201138. doi: 10.1084/jem.20201138. PMID: 33783474
  28. Heffron SP, Weinstock A, Scolaro B, Chen S, Sansbury BE, Marecki G, Rolling CC, El Bannoudi H, Barrett T, Canary JW, Spite M, Berger JS, Fisher EA. Platelet-conditioned media induces an anti-inflammatory macrophage phenotype through EP4. J Thromb Haemost. 2021 Feb;19(2):562-573. doi: 10.1111/jth.15172. Epub 2020 Dec 3. PMID: 33171016 [880]
  29. Herrera SC, Sainz de la Maza D, Grmai L, Margolis S, Plessel R, Burel M, O'Connor M, Amoyel M, Bach EA. Proliferative stem cells maintain quiescence of their niche by secreting the Activin inhibitor Follistatin. Dev Cell. 2021 Aug 2:S1534-5807(21)00593-1. doi: 10.1016/j.devcel.2021.07.010. PMID: 34363758
  30. Levic DS, Yamaguchi N, Wang S, Knaut H, Bagnat M. Knock-in tagging in zebrafish facilitated by insertion into non-coding regions. Development. 2021 Oct 1;148(19):dev199994. doi: 10.1242/dev.199994. Epub 2021 Oct 4. PMID: 34495314
  31. Liang F-X, Petzold C, Dancel-Manning K, Sall J, Ren PH, Zhou C. Challenges Facing an EM Core Laboratory: Mitochondria Structural Preservation and 3DEM Data Presentation. Microscopy Today 2021 jan;29:1 pp. 18 - 23 DOI: https://doi.org/10.1017/S1551929520001777 [cover]
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  33. Mitra S, Ryoo HD. The role of Ire1 in Drosophila eye pigmentation revealed by an RNase dead allele. Dev Biol. 2021 Oct;478:205-211. doi: 10.1016/j.ydbio.2021.07.008. Epub 2021 Jul 13. PMID: 34265355
  34. Moura Silva H, Kitoko JZ, Queiroz CP, Kroehling L, Matheis F, Yang KL, Reis BS, Ren-Fielding C, Littman DR, Bozza MT, Mucida D, Lafaille JJ. c-MAF-dependent perivascular macrophages regulate diet-induced metabolic syndrome. Sci Immunol. 2021 Oct;6(64):eabg7506. doi: 10.1126/sciimmunol.abg7506. Epub 2021 Oct 1. PMID: 34597123 [cover]
  35. Mukhopadhyay S, Biancur DE, Parker SJ, Yamamoto K, Banh RS, Paulo JA, Mancias JD, Kimmelman AC. Autophagy is required for proper cysteine homeostasis in pancreatic cancer through regulation of SLC7A11. Proc Natl Acad Sci U S A. 2021 Feb 9;118(6):e2021475118. doi: 10.1073/pnas.2021475118. PMID: 33531365 [880] [failed to acknowledge core]
  36. Nakamura R, Mukudai S, Bing R, Garabedian MJ, Branski RC. Complex fibroblast response to glucocorticoids may underlie variability of clinical efficacy in the vocal folds. Sci Rep. 2020 Nov 24;10(1):20458. doi: 10.1038/s41598-020-77445-9. PMID: 33235235 [AxioObserver] [failed to acknowledge core]
  37. Okuniewska M, Fang V, Baeyens A, Raghavan V, Lee JY, Littman DR, Schwab SR. SPNS2 enables T cell egress from lymph nodes during an immune response. Cell Rep. 2021 Jul 13;36(2):109368. doi: 10.1016/j.celrep.2021.109368. PMID: 34260944
  38. Penev A, Bazley A, Shen M, Boeke JD, Savage SA, Sfeir A. Alternative splicing is a developmental switch for hTERT expression. Mol Cell. 2021 Apr 6:S1097-2765(21)00228-8. doi: 10.1016/j.molcel.2021.03.033. PMID: 33852895
  39. Pérez-Hernández M, Marrón-Liñares GM, Schlamp F, Heguy A, van Opbergen CJM, Mezzano V, Zhang M, Liang FX, Cerrone M, Delmar M. Transcriptomic Coupling of PKP2 With Inflammatory and Immune Pathways Endogenous to Adult Cardiac Myocytes. Front Physiol. 2021 Jan 18;11:623190. doi: 10.3389/fphys.2020.623190. eCollection 2020. PMID: 33536940
  40. Rangel MV, McAllister N, Dancel-Manning K, Noval MG, Silva LA, Stapleford KA. Emerging chikungunya virus variants at the E1-E1 inter-glycoprotein spike interface impact virus attachment and Inflammation. J Virol. 2021 Dec 22:JVI0158621. doi: 10.1128/JVI.01586-21. PMID: 34935436
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  43. Teng KW, Tsai ST, Hattori T, Fedele C, Koide A, Yang C, Hou X, Zhang Y, Neel BG, O'Bryan JP, Koide S. Selective and noncovalent targeting of RAS mutants for inhibition and degradation. Nat Commun. 2021 May 11;12(1):2656. doi: 10.1038/s41467-021-22969-5. PMID: 33976200
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  45. Vasquez C, Mezzano V, Kessler N, Swardh F, Ernestad D, Mahoney VM, Hanna J, Morley GE. Connexin43 expression in bone marrow derived cells contributes to the electrophysiological properties of cardiac scar tissue. Sci Rep. 2020 Feb 13;10(1):2617. doi: 10.1038/s41598-020-59449-7. PMID: 32054938
  46. Voisin M, Shrestha E, Rollet C, Nikain CA, Josefs T, Mahé M, Barrett TJ, Chang HR, Ruoff R, Schneider JA, Garabedian ML, Zoumadakis C, Yun C, Badwan B, Brown EJ, Mar AC, Schneider RJ, Goldberg IJ, Pineda-Torra I, Fisher EA, Garabedian MJ. Inhibiting LXRα phosphorylation in hematopoietic cells reduces inflammation and attenuates atherosclerosis and obesity in mice. Commun Biol. 2021 Mar 26;4(1):420. doi: 10.1038/s42003-021-01925-5. PMID: 33772096
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  48. Xiong H, Mancini M, Gobert M, Shen S, Furtado GC, Lira SA, Parkhurst CN, Garambois V, Brengues M, Tadokoro CE, Trimarchi T, Gómez-López G, Singh A, Khiabanian H, Minuzzo S, Indraccolo S, Lobry C, Aifantis I, Herranz D, Lafaille JJ, Maraver A. Spleen plays a major role in DLL4-driven acute T-cell lymphoblastic leukemia. Theranostics. 2021 Jan 1;11(4):1594-1608. doi: 10.7150/thno.48067. eCollection 2021. PMID: 33408769
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2020

  1. Aulestia FJ, Groeling J, Bomfim GHS, Costiniti V, Manikandan V, Chaloemtoem A, Concepcion AR, Li Y, Wagner LE 2nd, Idaghdour Y, Yule DI, Lacruz RS. Fluoride exposure alters Ca2+ signaling and mitochondrial function in enamel cells. Sci Signal. 2020 Feb 18;13(619). pii: eaay0086. doi: 10.1126/scisignal.aay0086. PMID: 32071168 [TEM - failed to acknowledge the core]
  2. Banh RS, Biancur DE, Yamamoto K, Sohn ASW, Walters B, Kuljanin M, Gikandi A, Wang H, Mancias JD, Schneider RJ, Pacold ME, Kimmelman AC. Neurons Release Serine to Support mRNA Translation in Pancreatic Cancer. Cell. 2020 Nov 25;183(5):1202-1218.e25. doi: 10.1016/j.cell.2020.10.016. Epub 2020 Nov 2. PMID: 33142117
  3. Bekku Y, Salzer JL. Independent anterograde transport and retrograde cotransport of domain components of myelinated axons. J Cell Biol. 2020 Jun 1;219(6). pii: e201906071. doi: 10.1083/jcb.201906071. PMID: 32289157
  4. Bhattacharya A, Janal MN, Veeramachaneni R, Dolgalev I, Dubeykovskaya Z, Tu NH, Kim H, Zhang S, Wu AK, Hagiwara M, Kerr AR, DeLacure MD, Schmidt BL, Albertson DG. Oncogenes overexpressed in metastatic oral cancers from patients with pain: potential pain mediators released in exosomes. Sci Rep. 2020 Sep 7;10(1):14724. doi: 10.1038/s41598-020-71298-y. PMID: 32895418 [Talos]
  5. Boytard L, Hadi T, Silvestro M, Qu H, Kumpfbeck A, Sleiman R, Fils KH, Alebrahim D, Boccalatte F, Kugler M, Corsica A, Gelb BE, Jacobowitz G, Miller G, Bellini C, Oakes J, Silvestre JS, Zangi L, Ramkhelawon B. Lung-derived HMGB1 is detrimental for vascular remodeling of metabolically imbalanced arterial macrophages. Nat Commun. 2020 Aug 27;11(1):4311. doi: 10.1038/s41467-020-18088-2. PMID: 32855420 [TEM, confocal, individual ack, but no core ack]
  6. Brambilla L, Lahiri T, Cammer M, Levy DE. STAT3 Inhibitor OPB-51602 Is Cytotoxic to Tumor Cells Through Inhibition of Complex I and ROS Induction. iScience. 2020 Nov 18;23(12):101822. doi: 10.1016/j.isci.2020.101822. PMID: 33305182DSCS
  7. Cajamarca SA, Norris EH, van der Weerd L, Strickland S, Ahn HJ. Cerebral amyloid angiopathy-linked β-amyloid mutations promote cerebral fibrin deposits via increased binding affinity for fibrinogen. Proc Natl Acad Sci U S A. 2020 Jun 23;117(25):14482-14492. doi: 10.1073/pnas.1921327117. Epub 2020 Jun 9. PMID: 32518112
  8. Castro CM, Corciulo C, Solesio ME, Liang F, Pavlov EV, Cronstein BN. Adenosine A2A receptor (A2AR) stimulation enhances mitochondrial metabolism and mitigates reactive oxygen species-mediated mitochondrial injury. FASEB J. 2020 Feb 13. doi: 10.1096/fj.201902459R. PMID: 32052890 [880] [TEM]
  9. Crowley L, Cambuli F, Aparicio L, Shibata M, Robinson BD, Xuan S, Li W, Hibshoosh H, Loda M, Rabadan R, Shen MM. A single-cell atlas of the mouse and human prostate reveals heterogeneity and conservation of epithelial progenitors. Elife. 2020 Sep 11;9:e59465. doi: 10.7554/eLife.59465. PMID: 32915138 [TEM]
  10. Daley D, Zambirinis CP, Seifert L, Akkad N, Mohan N, Werba G, Barilla R, Torres-Hernandez A, Hundeyin M, Kumar Mani VR, Avanzi A, Tippens D, Narayanan R, Jang JE, Newman E, Pillarisetty VG, Dustin ML, Bar-Sagi D, Hajdu C, Miller G. γδ T Cells Support Pancreatic Oncogenesis by Restraining αβ T Cell Activation. Cell. 2020 Nov 12;183(4):1134-1136. doi: 10.1016/j.cell.2020.10.041. PMID: 33186522
  11. Egger R, Tupikov Y, Elmaleh M, Katlowitz KA, Benezra SE, Picardo MA, Moll F, Kornfeld J, Jin DZ, Long MA. Local Axonal Conduction Shapes the Spatiotemporal Properties of Neural Sequences. Cell. 2020 Oct 15;183(2):537-548.e12. doi: 10.1016/j.cell.2020.09.019. PMID: 33064989 [EM]
  12. Garshick MS, Tawil M, Barrett TJ, Salud-Gnilo CM, Eppler M, Lee A, Scher JU, Neimann AL, Jelic S, Mehta NN, Fisher EA, Krueger JG, Berger JS. Activated Platelets Induce Endothelial Cell Inflammatory Response in Psoriasis via COX-1. Arterioscler Thromb Vasc Biol. 2020 May;40(5):1340-1351. doi: 10.1161/ATVBAHA.119.314008. Epub 2020 Mar 5. PMID: 32131611
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2019

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  33. Saadipour K, Tiberi A, Lomardo S, Grajales E, Montroull L, Mañucat-Tan NB, LaFrancois J, Cammer M, Mathews PM, Scharfman HE, Liao FF, Friedman WJ, Zhou XF, Tesco G, Chao MV. Regulation of BACE1 expression after injury is linked to the p75 neurotrophin receptor. Mol Cell Neurosci. 2019 Aug 15:103395. doi: 10.1016/j.mcn.2019.103395. PMID: 31422108
  34. Silva HM, Báfica A, Rodrigues-Luiz GF, Chi J, Santos PDA, Reis BS, Hoytema van Konijnenburg DP, Crane A, Arifa RDN, Martin P, Mendes DAGB, Mansur DS, Torres VJ, Cadwell K, Cohen P, Mucida D, Lafaille JJ. Vasculature-associated fat macrophages readily adapt to inflammatory and metabolic challenges. J Exp Med. 2019 Apr 1;216(4):786-806. doi: 10.1084/jem.20181049. PMID: 30862706 cover
  35. Tikhonova AN, Dolgalev I, Hu H, Sivaraj KK, Hoxha E, Cuesta-Domínguez Á, Pinho S, Akhmetzyanova I, Gao J, Witkowski M, Guillamot M, Gutkin MC, Zhang Y, Marier C, Diefenbach C, Kousteni S, Heguy A, Zhong H, Fooksman DR, Butler JM, Economides A, Frenette PS, Adams RH, Satija R, Tsirigos A, Aifantis I. The bone marrow microenvironment at single-cell resolution. Nature. 2019 May;569(7755):222-228. doi: 10.1038/s41586-019-1104-8. Epub 2019 Apr 10. Erratum in: Nature. 2019 Jul 12; PMID: 30971824
  36. Torres-Hernandez A, Wang W, Nikiforov Y, Tejada K, Torres L, Kalabin A, Wu Y, Haq MIU, Khan MY, Zhao Z, Su W, Camargo J, Hundeyin M, Diskin B, Adam S, Rossi JAK, Kurz E, Aykut B, Shadaloey SAA, Leinwand J, Miller G. Targeting SYK signaling in myeloid cells protects against liver fibrosis and hepatocarcinogenesis. Oncogene. 2019 Feb 11. doi: 10.1038/s41388-019-0734-5. PMID: 30742098 [700]
  37. Zhang H, Christensen CL, Dries R, Oser MG, Deng J, Diskin B, Li F, Pan Y, Zhang X, Yin Y, Papadopoulos E, Pyon V, Thakurdin C, Kwiatkowski N, Jani K, Rabin AR, Castro DM, Chen T, Silver H, Huang Q, Bulatovic M, Dowling CM, Sundberg B, Leggett A, Ranieri M, Han H, Li S, Yang A, Labbe KE, Almonte C, Sviderskiy VO, Quinn M, Donaghue J, Wang ES, Zhang T, He Z, Velcheti V, Hammerman PS, Freeman GJ, Bonneau R, Kaelin WG Jr, Sutherland KD, Kersbergen A, Aguirre AJ, Yuan GC, Rothenberg E, Miller G, Gray NS, Wong KK. CDK7 Inhibition Potentiates Genome Instability Triggering Anti-tumor Immunity in Small Cell Lung Cancer. Cancer Cell. 2019 Dec 9. pii: S1535-6108(19)30523-9. doi: 10.1016/j.ccell.2019.11.003. PMID: 31883968 [880 - no acknowledgement]
  38. Zhang S, Dolgalev I, Zhang T, Ran H, Levine DA, Neel BG. Both fallopian tube and ovarian surface epithelium are cells-of-origin for high-grade serous ovarian carcinoma. Nat Commun. 2019 Nov 26;10(1):5367. doi: 10.1038/s41467-019-13116-2. PMID: 31772167

2018

  1. Astigarraga S, Douthit J, Tarnogorska D, Creamer MS, Mano O, Clark DA, Meinertzhagen IA, Treisman JE. Drosophila Sidekick is required in developing photoreceptors to enable visual motion detection. Development. 2018 Jan 18. pii: dev.158246. doi: 10.1242/dev.158246. PMID: 29361567
  2. Azoulay-Alfaguter I, Mor A. Proteomic analysis of human T cell-derived exosomes reveals differential RAS/MAPK signaling. Eur J Immunol. 2018 Sep 12. doi: 10.1002/eji.201847655. PMID: 30207595
  3. Beilin C, Choudhuri K, Bouma G, Malinova D, Llodra J, Stokes DL, Shimaoka M, Springer TA, Dustin ML, Thrasher AJ, Burns SO. Dendritic cell-expressed common gamma-chain recruits IL-15 for trans-presentation at the murine immunological synapse. Wellcome Open Res. 2018 Oct 17;3:84. doi: 10.12688/wellcomeopenres.14493.2. eCollection 2018. PMID: 30483599 [TIRF]
  4. Cai H, Muller J, Depoil D, Mayya V, Sheetz MP, Dustin ML, Wind SJ. Full control of ligand positioning reveals spatial thresholds for T cell receptor triggering. Nat Nanotechnol. 2018 Jul;13(7):610-617. doi: 10.1038/s41565-018-0113-3. Epub 2018 Apr 30. PMID: 29713075 [TIRF]
  5. Courgeon M, He D, Liu HH, Legent K, Treisman JE. The Drosophila Epidermal Growth Factor Receptor does not act in the nucleus. J Cell Sci. 2018 Aug 29. pii: jcs.220251. doi: 10.1242/jcs.220251. PMID: 30158176 [SP5]
  6. Cui X, Morales RT, Qian W, Wang H, Gagner JP, Dolgalev I, Placantonakis D, Zagzag D, Cimmino L, Snuderl M, Lam RHW, Chen W. Hacking macrophage-associated immunosuppression for regulating glioblastoma angiogenesis. Biomaterials. 2018 Apr;161:164-178. doi: 10.1016/j.biomaterials.2018.01.053. Epub 2018 Feb 3. PMID: 29421553 [AxioObserver] [710] [880]
  7. Dann R, Hadi T, Montenont E, Boytard L, Alebrahim D, Feinstein J, Allen N, Simon R, Barone K, Uryu K, Guo Y, Rockman C, Ramkhelawon B, Berger JS. Platelet-Derived MRP-14 Induces Monocyte Activation in Patients With Symptomatic Peripheral Artery Disease. J Am Coll Cardiol. 2018 Jan 2;71(1):53-65. doi: 10.1016/j.jacc.2017.10.072. PMID: 29301628 [LSM700]
  8. Davis D, Yuan H, Yang Y-M, Liang F-X, Sehgal PB. Interferon-α-induced cytoplasmic MxA structures in hepatoma Huh7 and primary endothelial cells. Contemp Oncol (Pozn) 2018 DOI: https://doi.org/10.5114/wo.2018.76149 [TEM]
  9. Derk J, Bermudez Hernandez K, Rodriguez M, He M, Koh H, Abedini A, Li H, Fenyö D, Schmidt AM. Diaphanous 1 (DIAPH1) is Highly Expressed in the Aged Human Medial Temporal Cortex and Upregulated in Myeloid Cells During Alzheimer's Disease. J Alzheimers Dis. 2018;64(3):995-1007. doi: 10.3233/JAD-180088. PMID: 29966194 [710] [no acknowledgement]
  10. Diamond JM, Vanpouille-Box C, Spada S, Rudqvist NP, Chapman JR, Ueberheide BM, Pilones KA, Sarfraz Y, Formenti SC, Demaria S. Exosomes Shuttle TREX1-Sensitive IFN-Stimulatory dsDNA from Irradiated Cancer Cells to DCs. Cancer Immunol Res. 2018 Aug;6(8):910-920. doi: 10.1158/2326-6066.CIR-17-0581. Epub 2018 Jun 15. PMID: 29907693 [TEM]
  11. Glait SA, Mahure S, Loomis CA, Cammer M, Pham H, Feldman A, Jazrawi LM, Strauss EJ. Regional histologic differences in the long head of the biceps tendon following subpectoral biceps tenodesis in patients with rotator cuff tears and SLAP lesions. Knee Surg Sports Traumatol Arthrosc. 2018 Jan 23. doi: 10.1007/s00167-018-4839-0. PMID: 29362860 [IJ]
  12. Hamaguchi S, Zafar MA, Cammer M, Weiser JN. Capsule prolongs survival of Streptococcus pneumoniae during starvation. Infect Immun. 2018 Jan 8. pii: IAI.00802-17. doi: 10.1128/IAI.00802-17. PMID: 29311231 [880 IJ]
  13. Huang HW, Brown B, Chung J, Domingos PM, Ryoo HD. highroad Is a Carboxypetidase Induced by Retinoids to Clear Mutant Rhodopsin-1 in Drosophila Retinitis Pigmentosa Models. Cell Rep. 2018 Feb 6;22(6):1384-1391. doi: 10.1016/j.celrep.2018.01.032. PMID: 29425495
  14. Kadle RL, Abdou SA, Villarreal-Ponce AP, Soares MA, Sultan DL, David JA, Massie J, Rifkin WJ, Rabbani P, Ceradini DJ. Microenvironmental cues enhance mesenchymal stem cell-mediated immunomodulation and regulatory T-cell expansion. PLoS One. 2018 Mar 7;13(3):e0193178. doi: 10.1371/journal.pone.0193178. eCollection 2018. PMID: 29513756
  15. Kistler KE, Trcek T, Hurd TR, Chen R, Liang FX, Sall J, Kato M, Lehmann R. Phase transitioned nuclear Oskar promotes cell division of Drosophila primordial germ cells. Elife. 2018 Sep 27;7. pii: e37949. doi: 10.7554/eLife.37949. PMID: 30260314
  16. Lee, JE; Yang, Y-M; Liang, F-X; Gough, DJ; Levy, DE; Sehgal, PB. Nongenomic STAT5-dependent effects on Golgi apparatus and endoplasmic reticulum structure and function. American journal of physiology. Cell physiology. 2012 302(5):C804-C820 (# 2937502)
  17. Liao Y, Chang HC, Liang FX, Chung PJ, Wei Y, Nguyen TP, Zhou G, Talebian S, Krey LC, Deng FM, Wong TW, Chicote JU, Grifo JA, Keefe DL, Shapiro E, Lepor H, Wu XR, DeSalle R, Garcia-España A, Kim SY, Sun TT. Uroplakins play conserved roles in egg fertilization and acquired additional urothelial functions during mammalian divergence. Mol Biol Cell. 2018 Oct 10:mbcE18080496. doi: 10.1091/mbc.E18-08-0496. PMID: 30303751 [TEM]
  18. Lim CH, Sun Q, Ratti K, Lee SH, Zheng Y, Takeo M, Lee W, Rabbani P, Plikus MV, Cain JE, Wang DH, Watkins DN, Millar S, Taketo MM, Myung P, Cotsarelis G, Ito M. Hedgehog stimulates hair follicle neogenesis by creating inductive dermis during murine skin wound healing. Nat Commun. 2018 Nov 21;9(1):4903. doi: 10.1038/s41467-018-07142-9. PMID: 30464171 [TEM]
  19. Lopez-Redondo ML, Coudray N, Zhang Z, Alexopoulos J, Stokes DL. Structural basis for the alternating access mechanism of the cation diffusion facilitator YiiP. Proc Natl Acad Sci U S A. 2018 Mar 5. pii: 201715051. doi: 10.1073/pnas.1715051115. PMID: 29507252
  20. Loria, SF, Prendini, L. Ultrastructural comparison of the eyespot and ocelli of scorpions, andimplications for the systematics of Chaerilidae Pocock, 1893. Zoologischer Anzeiger. 273 (2018) 183-191. [EM]
  21. McDonald-Hyman C, Muller JT, Loschi M, Thangavelu G, Saha A, Kumari S, Reichenbach DK, Smith MJ, Zhang G, Koehn BH, Lin J, Mitchell JS, Fife BT, Panoskaltsis-Mortari A, Feser CJ, Kirchmeier AK, Osborn MJ, Hippen KL, Kelekar A, Serody JS, Turka LA, Munn DH, Chi H, Neubert TA, Dustin ML, Blazar BR. The vimentin intermediate filament network restrains regulatory T-cell suppression of graft-versus-host disease. J Clin Invest. 2018 Aug 14. pii: 95713. doi: 10.1172/JCI95713. PMID: 30106752 [TEM] [710]
  22. Marcantoni E, Allen N, Cambria MR, Dann R, Cammer M, Lhakhang T, O’Brien MP, Ki, B, Worgall T, Heguy A, Tsirigos A, Berger JS. Platelet transcriptome profiling in HIV and ATP-binding cassette subfamily C member 4 (ABCC4) as a mediator of platelet activity. JACC Basic Transl Sci. Feb 2018 DOI: 10.1016/j.jacbts.2017.10.005
  23. Martin PK, Marchiando A, Xu R, Rudensky E, Yeung F, Schuster SL, Kernbauer E, Cadwell K. Autophagy proteins suppress protective type I interferon signalling in response to the murine gut microbiota. Nat Microbiol. 2018 Oct;3(10):1131-1141. doi: 10.1038/s41564-018-0229-0. Epub 2018 Sep 10. PMID: 30202015
  24. Mayya V, Judokusumo E, Abu Shah E, Peel CG, Neiswanger W, Depoil D, Blair DA, Wiggins CH, Kam LC, Dustin ML. Durable Interactions of T Cells with T Cell Receptor Stimuli in the Absence of a Stable Immunological Synapse. Cell Rep. 2018 Jan 9;22(2):340-349. doi: 10.1016/j.celrep.2017.12.052. PMID: 29320731
  25. Morrison CA, Chen H, Cook T, Brown S, Treisman JE. Glass promotes the differentiation of neuronal and non-neuronal cell types in the Drosophila eye. PLoS Genet. 2018 Jan 11;14(1):e1007173. doi: 10.1371/journal.pgen.1007173. eCollection 2018 Jan. PMID: 29324767
  26. Oksuz O, Narendra V, Lee CH, Descostes N, LeRoy G, Raviram R, Blumenberg L, Karch K, Rocha PP, Garcia BA, Skok JA, Reinberg D. Capturing the Onset of PRC2-Mediated Repressive Domain Formation. Mol Cell. 2018 Jun 21;70(6):1149-1162.e5. doi: 10.1016/j.molcel.2018.05.023. PMID: 29932905 [880]
  27. Peled M, Dragovich MA, Adam K, Strazza M, Tocheva AS, Vega IE, Mor A. EF Hand Domain Family Member D2 Is Required for T Cell Cytotoxicity. J Immunol. 2018 Oct 1. pii: ji1800839. doi: 10.4049/jimmunol.1800839. PMID: 30275048 [700]
  28. Pushalkar S, Hundeyin M, Daley D, Zambirinis CP, Kurz E, Mishra A, Mohan N, Aykut B, Usyk M, Torres LE, Werba G, Zhang K, Guo Y, Li Q, Akkad N, Lall S, Wadowski B, Gutierrez J, Kochen Rossi JA, Herzog JW, Diskin B, Torres-Hernandez A, Leinwand J, Wang W, Taunk PS, Savadkar S, Janal M, Saxena A, Li X, Cohen D, Sartor RB, Saxena D, Miller G. The Pancreatic Cancer Microbiome Promotes Oncogenesis by Induction of Innate and Adaptive Immune Suppression. Cancer Discov. 2018 Apr;8(4):403-416. doi: 10.1158/2159-8290.CD-17-1134. Epub 2018 Mar 22. PMID: 29567829
  29. Srivastava S, Li Z, Soomro I, Sun Y, Wang J, Bao L, Coetzee WA, Stanley CA, Li C, Skolnik EY. Regulation of KATP Channel Trafficking in Pancreatic β Cells by Protein Histidine Phosphorylation. Diabetes. 2018 Feb 12. pii: db171433. doi: 10.2337/db17-1433. PMID: 29440278
  30. Vazquez-Cintron EJ, Beske PH, Tenezaca L, Tran BQ, Oyler JM, Glotfelty EJ, Angeles CA, Syngkon A, Mukherjee J, Kalb SR, Band PA, McNutt PM, Shoemaker CB, Ichtchenko K. Engineering Botulinum Neurotoxin C1 as a Molecular Vehicle for Intra-Neuronal Drug Delivery. Sci Rep. 2017 Feb 21;7:42923. doi: 10.1038/srep42923.PMID: 28220863
  31. Velázquez P, Williams C, Leiner I, Pamer EG, Dustin ML. Distinct behavior of myelomonocytic cells and CD8 T cells underlies the hepatic response to Listeria monocytogenes. Wellcome Open Res. 2018 Apr 24;3:48. doi: 10.12688/wellcomeopenres.12941.1. eCollection 2018. PMID: 29862325
  32. Wang J, Yin Y, Lau S, Sankaran J, Rothenberg E, Wohland T, Meier-Schellersheim M, Knaut H. Anosmin1 Shuttles Fgf to Facilitate Its Diffusion, Increase Its Local Concentration, and Induce Sensory Organs. Dev Cell. 2018 Aug 14. pii: S1534-5807(18)30600-2. doi: 10.1016/j.devcel.2018.07.015. PMID: 30122631
  33. Wang L, Failler M, Fu W, Dynlacht BD. A distal centriolar protein network controls organelle maturation and asymmetry. Nat Commun. 2018 Sep 26;9(1):3938. doi: 10.1038/s41467-018-06286-y. PMID: 30258116
  34. Wang W, Marinis JM, Beal AM, Savadkar S, Wu Y, Khan M, Taunk PS, Wu N, Su W, Wu J, Ahsan A, Kurz E, Chen T, Yaboh I, Li F, Gutierrez J, Diskin B, Hundeyin M, Reilly M, Lich JD, Harris PA, Mahajan MK, Thorpe JH, Nassau P, Mosley JE, Leinwand J, Kochen Rossi JA, Mishra A, Aykut B, Glacken M, Ochi A, Verma N, Kim JI, Vasudevaraja V, Adeegbe D, Almonte C, Bagdatlioglu E, Cohen DJ, Wong KK, Bertin J, Miller G. RIP1 Kinase Drives Macrophage-Mediated Adaptive Immune Tolerance in Pancreatic Cancer. Cancer Cell. 2018 Nov 12;34(5):757-774.e7. doi: 10.1016/j.ccell.2018.10.006. PMID: 30423296
  35. Wu Q, Lin Y, Gu J, Sigurdsson EM. Dynamic assessment of tau immunotherapies in the brains of live animals by two-photon imaging. EBioMedicine. 2018 Aug 23. pii: S2352-3964(18)30327-X. doi: 10.1016/j.ebiom.2018.08.041. PMID: 30146345 [FVMPE]

2017

  1. Azoulay-Alfaguter I, Strazza M, Peled M, Novak HK, Muller J, Dustin ML, Mor A. The tyrosine phosphatase SHP-1 promotes T cell adhesion by activating the adaptor protein CrkII in the immunological synapse. Sci Signal. 2017 Aug 8;10(491). pii: eaal2880. doi: 10.1126/scisignal.aal2880. PMID: 28790195 [TIRF]
  2. Brown JA, Yonekubo Y, Hanson N, Sastre-Perona A, Basin A, Rytlewski JA, Dolgalev I, Meehan S, Tsirigos A, Beronja S, Schober M. TGF-β-Induced Quiescence Mediates Chemoresistance of Tumor-Propagating Cells in Squamous Cell Carcinoma. Cell Stem Cell. 2017 Nov 2;21(5):650-664.e8. doi: 10.1016/j.stem.2017.10.001. PMID: 29100014 [fig prod]
  3. Cabrera E, Mathews P, Mezhericher E, Beach TG, Deng J, Neubert TA, Rostagno A, Ghiso J. Aβ truncated species: Implications for brain clearance mechanisms and amyloid plaque deposition. Biochim Biophys Acta. 2017 Jul 12. pii: S0925-4439(17)30229-6. doi: 10.1016/j.bbadis.2017.07.005. PMID: 28711595
  4. Cai H, Depoil D, Muller J, Sheetz MP, Dustin ML, Wind SJ. Spatial Control of Biological Ligands on Surfaces Applied to T Cell Activation. Methods Mol Biol. 2017;1584:307-331. doi: 10.1007/978-1-4939-6881-7_18. PMID: 28255709 [TIRF]
  5. Cerrone M, Montnach J, Lin X, Zhao YT, Zhang M, Agullo-Pascual E, Leo-Macias A, Alvarado FJ, Dolgalev I, Karathanos TV, Malkani K, Van Opbergen CJM, van Bavel JJA, Yang HQ, Vasquez C, Tester D, Fowler S, Liang F, Rothenberg E, Heguy A, Morley GE, Coetzee WA, Trayanova NA, Ackerman MJ, van Veen TAB, Valdivia HH, Delmar M. Plakophilin-2 is required for transcription of genes that control calcium cycling and cardiac rhythm. Nat Commun. 2017 Jul 24;8(1):106. doi: 10.1038/s41467-017-00127-0. PMID: 28740174 [EM]
  6. Chen YW, Huang SX, de Carvalho ALRT, Ho SH, Islam MN, Volpi S, Notarangelo LD, Ciancanelli M, Casanova JL, Bhattacharya J, Liang AF, Palermo LM, Porotto M, Moscona A, Snoeck HW. A three-dimensional model of human lung development and disease from pluripotent stem cells. Nat Cell Biol. 2017 May;19(5):542-549. doi: 10.1038/ncb3510. PMID: 28436965 [EM]
  7. Cimmino L, Dolgalev I, Wang Y, Yoshimi A, Martin GH, Wang J, Ng V, Xia B, Witkowski MT, Mitchell-Flack M, Grillo I, Bakogianni S, Ndiaye-Lobry D, Martín MT, Guillamot M, Banh RS, Xu M, Figueroa ME, Dickins RA, Abdel-Wahab O, Park CY, Tsirigos A, Neel BG, Aifantis I. Restoration of TET2 Function Blocks Aberrant Self-Renewal and Leukemia Progression. Cell. 2017 Aug 16. pii: S0092-8674(17)30868-1. doi: 10.1016/j.cell.2017.07.032. PMID: 28823558
  8. Daley D, Mani VR, Mohan N, Akkad N, Pandian GSDB, Savadkar S, Lee KB, Torres-Hernandez A, Aykut B, Diskin B, Wang W, Farooq MS, Mahmud AI, Werba G, Morales EJ, Lall S, Wadowski BJ, Rubin AG, Berman ME, Narayanan R, Hundeyin M, Miller G. NLRP3 signaling drives macrophage-induced adaptive immune suppression in pancreatic carcinoma. J Exp Med. 2017 Apr 25. pii: jem.20161707. doi: 10.1084/jem.20161707. PMID: 28442553 [700]
  9. Fang V, Chaluvadi VS, Ramos-Perez WD, Mendoza A, Baeyens A, Rivera R, Chun J, Cammer M, Schwab SR. Gradients of the signaling lipid S1P in lymph nodes position natural killer cells and regulate their interferon-γ response. Nature Immunology. Nat Immunol. 2017 Jan;18(1):15-25. doi: 10.1038/ni.3619 PMID: 27841869 [710] [IJ]
  10. Gellen, TA, Lem, J, Turner, DB. Probing Homogeneous Line Broadening in CdSe Nanocrystals Using Multidimensional Electronic Spectroscopy. Nano Lett. April 19, 2017, DOI: 10.1021/acs.nanolett.6b05068 [TEM]
  11. Hanna, S, McCoy-Simandle, K, Miskolci, V, Guo, P, Cammer, M, Hodgson, L, Cox, D. The Role of Rho-GTPases and actin polymerization during Macrophage Tunneling Nanotube Biogenesis. Sci Rep 2017 Aug 17;7(1):8547. doi: 10.1038/s41598-017-08950-7. PMID: 28819224
  12. Jang JE, Hajdu CH, Liot C, Miller G, Dustin ML, Bar-Sagi D. Crosstalk between Regulatory T Cells and Tumor-Associated Dendritic Cells Negates Anti-tumor Immunity in Pancreatic Cancer. Cell Rep. 2017 Jul 18;20(3):558-571. doi: 10.1016/j.celrep.2017.06.062. PMID: 28723561. [710] [Imaris]
  13. Jian J, Hettinghouse A, Liu CJ. Progranulin acts as a shared chaperone and regulates multiple lysosomal enzymes. Genes Dis. 2017 Sep;4(3):125-126. doi: 10.1016/j.gendis.2017.05.001. PMID: 28944282
  14. Krishnan S, Smits AH, Vermeulen M, Reinberg D. Phospho-H1 Decorates the Inter-chromatid Axis and Is Evicted along with Shugoshin by SET during Mitosis. Mol Cell. 2017 Jul 26. pii: S1097-2765(17)30502-6. doi: 10.1016/j.molcel.2017.07.008. PMID: 28781233
  15. Lee JK, Hallock PT, Burden SJ. Abelson tyrosine-protein kinase 2 regulates myoblast proliferation and controls muscle fiber length. Elife. 2017 Dec 12;6. pii: e29905. doi: 10.7554/eLife.29905. PMID: 29231808 [TEM]
  16. Lye DS, Xia Y, Wong MZ, Wang Y, Nieh M-P, Weck M, ABC Supramolecular Triblock Copolymer by ROMP and ATRP. Macromolecules. Accepted April 26, 2017. DOI:10.1021/acs.macromol.7b00169 [EM]
  17. Marcantoni, E, Allen, N, Cambria, MR, Dann, R, Cammer, M, Lhakhang, T, O’Brien, MP, Kim, B, Worgall, T, Heguy, A, Tsirigos, A, Berger JS. Platelet transcriptome profiling in HIV and ATP-binding cassette subfamily C member 4 (ABCC4) as a mediator of platelet activity. JACC Basic Transl Sci. Accepted. [880]
  18. Martínez-Velázquez LA, Ringstad N. Antagonistic regulation of trafficking to Caenorhabditis elegans sensory cilia by a Retinal Degeneration 3 homolog and retromer. Proc Natl Acad Sci U S A. 2017 Dec 27. pii: 201712302. doi: 10.1073/pnas.1712302115. PMID: 29282322
  19. Matsuzawa-Ishimoto, Y, Shono, Y, Gomez, L, Hubbard-Lucey, V, Cammer, M, Neil, J, Dewan, MZ, Lieberman, S, Lazrak, A, Marinis, J, Beal, A, Harris, P, Bertin, J, Liu, C, Ding, Y, van den Brink, M, Cadwell, K. Autophagy protein ATG16L1 prevents necroptosis in the intestinal epithelium. J Exp Med. 2017 Oct 31. pii: jem.20170558. doi: 10.1084/jem.20170558. PMID: 29089374 [AxioObserver]
  20. Maus M, Cuk M, Patel B, Lian J, Ouimet M, Kaufmann U, Yang J, Horvath R, Hornig-Do HT, Chrzanowska-Lightowlers ZM, Moore KJ, Cuervo AM, Feske S. Store-Operated Ca2+ Entry Controls Induction of Lipolysis and the Transcriptional Reprogramming to Lipid Metabolism. Cell Metab. 2017 Jan 21. pii: S1550-4131(16)30654-4. doi: 10.1016/j.cmet.2016.12.021. PMID: 28132808 [TEM] [LM]
  21. Mendoza A, Fang V, Chen C, Serasinghe M, Verma A, Muller J, Chaluvadi VS, Dustin ML, Hla T, Elemento O, Chipuk JE, Schwab SR. Lymphatic endothelial S1P promotes mitochondrial function and survival in naive T cells. Nature. 2017 May 24. doi: 10.1038/nature22352. PMID: 28538737
  22. Pekar O, Ow MC, Hui KY, Noyes MB, Hall SE, Hubbard EJA. Linking the environment, DAF-7/TGFβ signaling and LAG-2/DSL ligand expression in the germline stem cell niche. Development. 2017 Aug 15;144(16):2896-2906. doi: 10.1242/dev.147660. PMID: 28811311
  23. Peled M, Tocheva AS, Sandigursky S, Nayak S, Philips EA, Nichols KE, Strazza M, Azoulay-Alfaguter I, Askenazi M, Neel BG, Pelzek AJ, Ueberheide B, Mor A. Affinity purification mass spectrometry analysis of PD-1 uncovers SAP as a new checkpoint inhibitor. Proc Natl Acad Sci U S A. 2017 Dec 27. pii: 201710437. doi: 10.1073/pnas.1710437115. PMID: 29282323 [LSM700]
  24. Rabbani PS, Zhou A, Borab ZM, Frezzo JA, Srivastava N, More HT, Rifkin WJ, David JA, Berens SJ, Chen R, Hameedi S, Junejo MH, Kim C, Sartor RA, Liu CF, Saadeh PB, Montclare JK, Ceradini DJ. Novel lipoproteoplex delivers Keap1 siRNA based gene therapy to accelerate diabetic wound healing. Biomaterials. 2017 Jul;132:1-15. doi: 10.1016/j.biomaterials.2017.04.001. Epub 2017 Apr 3. PMID: 28391065
  25. Strazza M, Azoulay-Alfaguter I, Peled M, Smrcka AV, Skolnik EY, Srivastava S, Mor A. PLCε1 regulates SDF-1α-induced lymphocyte adhesion and migration to sites of inflammation. Proc Natl Acad Sci U S A. 2017 Feb 17. pii: 201612900. doi: 10.1073/pnas.1612900114. PMID: 28213494 [700] [Volocity]
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2016

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2015

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2014

  1. Agullo-Pascual E., Lin X., Leo-Macias A., Zhang M., Liang F.-X., Li Z., Pfenniger A., Lubkemeier I., Keegan S., Fenyo D., Willecke K., Rothenberg E. and Delmar M. (2014) Super-resolution imaging reveals that loss of the C-terminus of connexin43 limits microtubule plus-end capture and Nav1.5 localization at the intercalated disc. Cardiovascular Research 104: 371-381. [EM]
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  11. Krishnaswamy S, Lin Y, Rajamohamedsait WJ, Rajamohamedsait HB, Krishnamurthy P, Sigurdsson EM. Antibody-derived in vivo imaging of tau pathology. J Neurosci. 2014 Dec 10;34(50):16835-50. doi: 10.1523/JNEUROSCI.2755-14.2014. PMID: 25505335
  12. Longman RS, Diehl GE, Victorio DA, Huh JR, Galan C, Miraldi ER, Swaminath A, Bonneau R, Scherl EJ, Littman DR. CX3CR1+ mononuclear phagocytes support colitis-associated innate lymphoid cell production of IL-22. J Exp Med. 2014 Jul 14. pii: jem.20140678. PMID: 25024136 [710]
  13. Ota M, Horiguchi M, Fang V, Shibahara K, Kadota K, Loomis C, Cammer M, Rifkin DB. Genetic suppression of inflammation blocks the tumor-promoting effects of TGF-β in gastric tissue. Cancer Res. 2014 May 1;74(9):2642-51. doi: 10.1158/0008-5472.CAN-13-3404. PMID: 24590056
  14. Ramanan D, Tang MS, Bowcutt R, Loke P, Cadwell K. Bacterial sensor Nod2 prevents inflammation of the small intestine by restricting the expansion of the commensal Bacteroides vulgatus. Immunity. 2014 Aug 21;41(2):311-24. doi: 10.1016/j.immuni.2014.06.015. PMID: 25088769
  15. Todd K, Fossati S, Ghiso J, Rostagno A. Mitochondrial dysfunction induced by a post-translationally modified amyloid linked to a familial mutation in an alternative model of neurodegeneration. Biochim Biophys Acta. 2014 Dec;1842(12 Pt A):2457-67. doi: 10.1016/j.bbadis.2014.09.010. PMID: 25261792
  16. Vieira N., Deng F.-M., Liang F.-X., Chang J. Zhou G. Zheng W., Simon J.P., Ding M. Romih R. Kreibich G. and Sun T.-T (2014) SNX31: a novel sorting nexin associated with the uroplakin-degrading multivesicular bodies in terminally differentiated urothelial cells. PLoS One 9(6): e99644.

2013

  1. Ditmarsch D.V., Boyle K.E., Sakhtah H., Oyler J.E., Nadell C.D., Deziel E., Dietrich L.E.P. and Xavier J.B. (2013) Convergent evolution of hyperswarming leads to impaired biofilm formation in pathogenic bacteria. Cell Reports 4: 1-12. [Comments on New York Times]
  2. Gandhi D., Molotkov A., Batoruina E., Schneider K., Dan H., Relley M., Laufer Ed., Metzger D., Liang, F-X., Liao Y., Sun T.-T., Aronow B., Rosen R., Mauney J., Adam R., Rosselot C., Batavia J.V., McMahon A., Mchahon J., Guo J.-J. and Mendelsohn C. (2013) Retinoid signaling in progenitors controls specification and regeneration of the urothelium, Developmental Cell 26: 469-482.
  3. Khan R., Lee J.E., Yang Y.-M., Liang F.-X. and Sehgal P.B. (2013) Live-cell imaging of the association of STAT6 with mitochondria, PLoS ONE 8 (1): e55426.
  4. Lee J.E., Yuan H., Liang F.-X. and Sehgal P.B. (2013) Nitric oxide scavenging causes remodeling of the endoplasmic reticulum, Golgi apparatus and mitochondria in pulmonary arterial endothelial cells, Nitric Oxide: Biology & Chemistry 33: 64-73.
  5. Leo-Macias, A; Liang, F; Delmar, M. (2013) 3D tomographic segmentation of adult cardiac ventricle reveals a complex tubular and vesicular network surrounding the gap junction plaque. Ultrastructure of the Connexome. Heart Rhythm 10(11): 1749-1750. [EM]
  6. Li J., D’Angiolella V.D., Seeley E.S., Kim S., Kobayashi T., Fu W., Campos E.I., Pagano M. and Dynlacht B.D. (2013) USP33 regulates centrosome biogenesis via deubiquitination of the centriolar protein CP110. Nature 495: 255-260.
  7. Liang F.-X. (2013) A research driven microscopy core at NYULMC, Proceedings Microscopy and Microanalysis 2013, 70. [EM]
  8. Pancratov R.,Peng, F., Smibert P., Yang J.-S. Olson E.R., Guha-Gilford C., Kapoor A.J., Liang F.-X., Lai E.-C., Flaherty M.S., Ramanuj D. (2013) The miR-310/13 cluster antagonizes beta-catenin function in the regulation of germ and somatic cell differentiation in the Drosophila testis, Development 140 (14): 2904-2916.
  9. Rehman A, Hemmert KC, Ochi A, Jamal M, Henning JR, Barilla R, Quesada JP, Zambirinis CP, Tang K, Ego-Osuala M, Rao RS, Greco S, Deutsch M, Narayan S, Pachter HL, Graffeo CS, Acehan D, Miller G. Role of fatty-acid synthesis in dendritic cell generation and function. J Immunol. 2013 May 1;190(9):4640-9. doi: 10.4049/jimmunol.1202312. PMID: 23536633 [TEM]
  10. Slonczewski J.L. and Foster J. W. (2013) Microbiology, 3e, W. W. Norton Publishers. [Picture was cited in this text book]
  11. Takeo M., Chou W.-C., Sun Q., Lee W., Rabbani P., Loomis C., Taketo M.M. and Ito M. (2013) Wnt activation in nail epithelium couples nail growth to digit regeneration. Nature 499: 228-232.
  12. Waite JC, Vardhana S, Shaw PJ, Jang JE, McCarl CA, Cameron TO, Feske S, Dustin ML. Interference with Ca(2+) release activated Ca(2+) (CRAC) channel function delays T-cell arrest in vivo. Eur J Immunol. 2013 Dec;43(12):3343-54. doi: 10.1002/eji.201243255. PMID: 23939929
  13. Wu J.-W., Herman M. Liu L., Simoes S. and Duff K. E. (2013) Small misfolder Tau species are internalized via bulk endocytosis and anterogradely and retrogradely transported in neurons. Journal of Biological Chemistry 288(3): 1856-1870

2012

  1. Cerrone M., Noorman M., Lin X., Chkourko H., Liang F.-X., Nagel R.v.d., Hund T., Birchmeier W., Mohler P., Veen T.A.v., Rijen H.V.v. and Delmar M. (2012) Sodium current deficit and arrhythmogenesis in a murine model of plakophilin-2 haploinsufficiency. Cardiovascular Research 95: 460-468.
  2. Chen D., Fan W., Lu Y., Ding X., Chen S. and Zhong Q. (2012) A mammalian autophagosome maturation mechanism mediated by TECPR1 and the Atg12-Ath5 conjugate, Molecular Cell 45(5): 629-641.
  3. Delmar M. and Liang F.-X. (2012) Connexin 43 and the regulation of intercalated disc function. Heart Rhythm 9(5): 835-838. [Cover] [EM]
  4. Gravitz L. (2012) The critters within – your gut microflora might be aiding and abetting diabetes. Nature 485(17): S12-S13. [Picture was cited in this article]
  5. Lee J.E., Yang Y.M., Liang F.-X. Gough D.J., Levy D.E. and Sehgal P.B. (2012) Nongenomic STAT5-dependent effects on golgi apparatus and endoplasmic reticulum structure and function. American Journal of Physiology-Cell Physiology, 302(5): C804-820.
  6. Li J., Kim S., Kobayashi T., Liang F-X., Korzeniewski N., Duensing S. and Dynlacht B.D. (2012) Neurl4, a novel daughter centriole protein, prevents formation of ectopic microtuble organizing centres. EMBO Reports 13(6): 547-553.
  7. Rama G., Chena J., Kumara K., Rossa H. F., Ubedaa C., Damleb P. K., Laneb K. D., Penadésc J. R., Christieb G. E. and Novicka R. P. (2012) Staphylococcal pathogenicity island interference with helper phage reproduction is a paradigm of molecular parasitism, Proceedings of the National Academy of Science 109:16300-16305.
  8. Zhou G., Liang F.-X, Romih R., Wang Z., Liao Y., Ghiso J., Luque-Garcia J.L., Neubert T., Kreibich G., Alonso M.A., Schaeren-Wiemers N. and Sun. T.-T. (2012) MAL facilitates the incorporation of exocytic uroplakin-delivering vesicles into the apical membrane of urothelial umbrella cells. Molecular Biology of the Cell 23(7): 1354-1366.

2011

  1. Dai M., Haghphnah J., Singh N., Roth E.W., Liang A. Tu R.S and Montclare J.K. (2011) Artificial protein block polymer libraries bearing two SADs: effects of elastin domain repeats. Bio Macromolecules 12: 4240-4246.
  2. Gregory S.A., Wu C. -C., Cardozo T. and Stokes D.L. (2011) The Architecture of CopA from Archeaoglobus fulgidus Studied by Cryo-Electron Microscopy and Computational Docking. Structure 19(9): 1219–1232.
  3. MuMont A.L., Nygaard T.K., Watkins R L., Smith A., Kozhaya L., Kreiswirth B.N., Shopsin B., Unutmaz D., Voyich J.M. and Torres V.J. (2011) Characterization of a new cytotoxin that contributes to Staphylococcus aureus pathogenesis. Molecular Microbiology 79(3): 814-825.
  4. Nans A., Einheber S., Salzer J.L. and Stokes D.L. (2011) Electron tomography of paranodal septate-like junctions and the associated axonal and glial cytoskeletons in the central nervous system. Journal of Neuroscience Research 89(3): 310-9.
  5. Nans A., Mohandas N., Stokes D.L. (2011) Native ultrastructure of the red cell cytoskeleton by cryo-electron tomography. Biophysical Journal 101(10): 2341-50.
  6. Sczesnak A., Segata N., Qing X., Gevers D., Petrosino J.F., Huttenhower C., Littman D.R. and Ivanov I.I. (2011) The genome of Th17 cell-inducing segmented filamented filamentous bacteria reveals extensive auxotrophy and adaptations to the intestinal environment. Cell Host & Microbe 10(3): 260-272. [Cover]
  7. Waite JC, Leiner I, Lauer P, Rae CS, Barbet G, Zheng H, Portnoy DA, Pamer EG, Dustin ML. Dynamic imaging of the effector immune response to listeria infection in vivo. PLoS Pathog. 2011 Mar;7(3):e1001326. doi: 10.1371/journal.ppat.1001326. PMID: 21455492
  8. Wang J., Yi Z., Wang S., Li Z. (2011) The effect of decitabine on megakaryocyte maturation and platelet release. Thromb Haemost 106(2): 337-43.
  9. Wehman A.M., Poggioli C., Schweinsberg P., Grant B.D. and Nance J. (2011) The P4-ATPase TAT-5 inhibits the budding of extracellular vesicles in C. elegans embryos. Current Biology 21: 1951-1959.

2010 and earlier

  1. Boland B., Kumar A., Lee S., Platt F.M., Wegiel J., Yu W.-H. and Nixon R.A. (2008) Autophagy induction and autophagosome clearance in neurons: relationship to autophagic pathology in Alzheimer's disease. J Neuroscience 28(27): 6926-37.
  2. Fossati S., Cam J., Meyerson J., Mezhericher E., Romero I. A., Couraud P. O., Weksler B. B., Ghiso J. and Rostagno A. (2010) Differential activation of mitochondrial apoptotic pathways by vasculotropic amyloid-β variants in cells composing the cerebral vessel walls. The FASEB Journal. 24: 229-241.
  3. Ghidoni R., Paterlini A., Albertini V., Glionna M., Monti E., Schiaffonati L., Benussi L., Levy E. and Binetti G. (2009) Cystatin C is released in association with exosomes: A new tool of neuronal communication which is unbalanced in Alzheimer's disease. Neurobiology Aging 9: 7392.
  4. Gillespie P. A., Kang G. S., Elder A., Gelein R., Chen L., Moreira A. L., Koberstein J., Tchou-Wong K., Gordon T., Chen L.C. (2010) Pulmonary response after exposure to inhaled nickel hydroxide nanoparticles: Short and long-term studies in mice. Nanotoxicology 4(1): 106–119.
  5. Goni F., Prelli F., Ji Y., Scholtzova H., Yang J., Sun Y., Liang F.-X., Kascsak R., Kascsak R., Mehta P. and Wisniewski T. (2010) Immunomodulation targeting abnormal protein conformation reduces pathology in a mouse model of alzheimer’s disease. PLoS One 5(10): e13391
  6. Haghpanah J.S., Yuvienco C., Roth E.W., Liang A., Tu R.S., Montclare J.K. (2010) Supramolecular assembly and small molecule recognition by genetically engineered protein block polymers composed of two SADs. Molecular Biosystems 6(9): 1662-7.
  7. Hernandez-Guillamon M., Mawhirt S., Fossati S., Blais S., Pares M., Penalba A., Boada M., Couraud P.O., Neubert T.A., Montaner J., Ghiso J., Rostagno A. (2010) Matrix metalloproteinase 2 (MMP-2) degrades soluble vasculotropic amyloid {beta} E22Q and L34V mutants delaying their toxicity for human brain microvascular endothelial cells. J Bio Chem 285(35): 27144-58.
  8. Ivanov I.I., Atarashi K., Manel N., Brodie E.L., Shima T., Karaoz U., Wei D., Goldfarb K.C., Santee C.A., Lynch S.V., Tanoue T., Imaoka A., Itoh K., Takeda K., Umesaki Y., Honda K. and Littman D.R. (2009) Induction of Intestinal Th17 Cells by Segmented Filamentous Bacteria. Cell 139: 485–498.
  9. Ivanov I.I. and Littman D.R. (2010) Segmented filamentous bacteria take the stage. Mucosal Immunology 3(3): 209-12. [Picture was cited by Microbiology text book]
  10. Liu Y., Mo L., Goldfarb D.S., Evan A.P., Liang F., Khan S.R., Lieske J.C., Wu X.-R. (2010) Progressive renal papillary calcification and ureteral stone formation in mice deficient for Tamm-Horsfall Protein. American Journal of Physiology Renal Physiology 299(3): F469-78.
  11. Novick R. P., Christie G. E. and Penadés J. R. (2010) The phage-related chromosomal islands of Gram-positive bacteria, Nature Review Microbiology 8(8): 541–551
  12. Chris van Oevelen, Christopher Bowman, Jessica Pellegrino, Patrik Asp, Jemmie Cheng, Fabio Parisi, Mariann Micsinai, Yuval Kluger, Alphonse Chu, Alexandre Blais, Gregory David, and Brian D. Dynlacht. The Mammalian Sin3 Proteins Are Required for Muscle Development and Sarcomere Specification. Mol Cell Biol. 2010 Dec; 30(24): 5686–5697. doi: 10.1128/MCB.00975-10 PMCID: PMC3004272 [TEM]
  13. Solitoa R., Cortia F., Fossatib S., Mezhericherb E., Donninia S., Ghisob J., Giachettia A., Rostagno A. and Zichea M. (2009) Dutch and arctic mutant peptides of β amyloid1–40 differentially affect the FGF-2 pathway in brain endothelium. Experimental Cell Research 315: 385-395.
  14. Su H., Marcheva B., Meng S., Liang, F., Kohsaka A., Kobayashi Y., Xu A.-W., Bass J. and Wang X. (2010) Gamma-protocadherins regulate the functional intergrity of hypothalamic feeding circuitry in mice. Developmental Biology 339:38-50.
  15. Zhang J.-X., Diehl G.E. and Littman D.R. (2008) Relief of preintegration inhibition and characterization of additional blocks for HIV replication in primary mouse T cells. PLoS ONE Apr 30: 3(4).
  16. Zito E., King-Tung Chin K.-T., Blais J., Harding H.P. and Ron D. (2010) ERO1-β, a pancreas-specific disulfide oxidase, promotes insulin biogenesis and glucose homeostasis, Journal of Cell Biology 188(6): 821–832.